J4 ›› 2013, Vol. 35 ›› Issue (12): 26-33.
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SONG Chenglong,ZOU Chen,WANG Wenke,LI Si kun
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Abstract:
With the rise and the rapid development of system
biology, in order to explore the relationship between different levels of Bioinformatics
relevance, the need of comprehensive visualization of biological scientific computing data
at different levels is increasingly urgent. A method of constructing an integration
framework to realize the comprehensive visualization of molecular structure data and genomic
sequence data is proposed. The visualization integration framework can achieve the unified
management and unified GUI for different levels of visualization tools. By defining the
method of describing the associated data, the framework realizes the integration of exiting
molecular structure data and genomic sequence data and effectively supports the development
of integrated function for visual molecular structure data and genomic sequence data. The
method is used to develop a comprehensive visualization prototype system of molecular
structure data and gene sequence data, realizing comprehensive visualization functions such
as the synchronous display of both molecular structure data and genomic sequence data, and
the display of the gene fragments and the local space structure of related molecular, and so
on. Preliminary application and analysis show that the comprehensive visualization method is
proposed with good scalability. The realized comprehensive visualization functions have good
application prospects for studying the incidence relationship between molecular structure
data and genomic sequence data.
Key words: scientific visualization;molecular structure visualization;genomic sequence visualization;synthesized visualization;integration framework;data relevance
SONG Chenglong,ZOU Chen,WANG Wenke,LI Si. Research on comprehensive visualization method of molecular structure and gene sequence data [J]. J4, 2013, 35(12): 26-33.
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http://joces.nudt.edu.cn/EN/Y2013/V35/I12/26